CRATE
1. Introduction
2. Installing CRATE
3. Preprocessing tools
4. Anonymisation
4.1. Overview of anonymisation
4.2. The anonymiser config file
4.3. Data dictionary (DD)
4.4. Run the anonymiser
4.5. Specific databases
4.6. Using CRATE’s anonymisation API web server
4.7. Anonymisation API documentation
5. Natural language processing (NLP)
6. Configuring the CRATE web interface
7. Using the CRATE web interface
8. Ancillary tools
9. FAQs and troubleshooting
10. Linkage tools
11. Additional notes
12. Automatic documentation of source code
13. Index of CRATE commands
14. Licences
15. Change log/history
16. Abbreviations
17. Glossary
CRATE
4.
Anonymisation
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4.
Anonymisation
4.1. Overview of anonymisation
4.2. The anonymiser config file
4.2.1. Format of the configuration file
4.2.2. [main] section
4.2.3. [extra_regexes] section
4.2.4. Database config sections
4.2.5. Hasher definitions
4.2.6. Anonymisation sequence
4.2.7. Minimal anonymiser config
4.2.8. Specimen config
4.3. Data dictionary (DD)
4.3.1. Drafting a data dictionary
4.3.2. Columns in the data dictionary
4.3.3. Minimal data dictionary example
4.4. Run the anonymiser
4.4.1. crate_anonymise
4.4.2. crate_anonymise_multiprocess
4.4.3. crate_anon_show_counts
4.4.4. crate_anon_check_text_extractor
4.4.5. crate_anon_summarize_dd
4.4.6. crate_researcher_report
4.4.7. crate_subset_db
4.5. Specific databases
4.5.1. Servelec RiO
4.5.2. PCMIS
4.5.3. TPP SystmOne
4.6. Using CRATE’s anonymisation API web server
4.7. Anonymisation API documentation